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I’m writing a cover letter for my final paper from my PhD. I couldn’t find a latex template so I made one myself. I hope it can be useful to others.
I’ve shared the work on my github and as an Overleaf template.
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These authors would write this paper, and I mean that in the good way. We have Andy Fire, who is famous for a deeply thoughtful career in RNA biology. We have Ami Bhatt: a world-class researcher who leads a group that generates and interprets micro-biome sequencing data. We also have the participation of Robert C. Edgar on the paper — he is, as far as I am aware, the only “independent researcher” in biology that is respected. His open-source software MUSCLES its way into many a phylogenetic analysis. Plus I like his style:
this is the platonic case of a dude who got rich by selling a tech company in the late 90s
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In this little project, I wanted to try out the Dalle API along with some very simple python functions for combination generation and plotting to create a semi-random collage of Dalle edits of American Gothic. I had a good time using the Dalle API and the davinci text API to put together a remixed collage of American Gothic. While coding this up, I used chatGPT to help with the plotting, which added a meta layer to the experience. Next up, I’ll play with the whisper model from OpenAI.
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I wanted to understand if LLM / PLMs can be useful for analyzing antibody sequence data. Antibodies are proteins made by the immune system which are critical for protection against viruses. Here I used antibody sequencing data, AbLang (Antibody LLM), and single-cell rna sequencing data investigate.
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